Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCCAAAAGCATTGTTTTCCAGGG
.(((((...(((((((......&.)))))))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016147
GeneSymbolPPME1
Binding site1452,1478
Score1.0
Seed0
Au0.5
Energy-17.6
Binding len17
Me-8.707
Phylopstem1.1681177142857142
Phylopflank0.9025523220000001
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end2
Position3UTR
2D Structure