Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTTGTACCCCAGGAGAGGAGCATTGTTGGCCAGGA
.((((((..(((((((......&.)))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016151
GeneSymbolTAOK2
Binding site3375,3410
Score0.846
Seed1
Au0.382
Energy-22.4
Binding len17
Me-7.163
Phylopstem-0.33394071428571426
Phylopflank0.8279542475000001
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end2
PositionCDS
2D Structure