Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGGAGGTAGAGATCGCAGCTGTGAC
((((((((((((((..((((.&))))...........)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016151
GeneSymbolTAOK2
Binding site1181,1211
Score0.808
Seed1
Au0.397
Energy-21.9
Binding len30
Me-4.906
Phylopstem5.472690928571427
Phylopflank5.47343771125
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure