Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACGGTGTGGCAGGG
.((((.(((((..(((((((..&)))))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016153
GeneSymbolHSFX1
Binding site363,381
Score0.923
Seed0
Au0.368
Energy-20.8
Binding len18
Me-10.33
Phylopstem-0.13612325714285717
Phylopflank-0.567085055
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end6
Position5UTR
2D Structure