Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTAGTGGCTGCTGGGGCTGCAC
.(((((((.((((.((.....&.)).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016153
GeneSymbolHSFX1
Binding site1721,1746
Score0.846
Seed1
Au0.353
Energy-20.7
Binding len17
Me-5.707
Phylopstem-0.13889857142857148
Phylopflank-0.47836921500000007
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure