Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTCCCTCCCCAGTTGCAGT
(((((((((.((..(.(((((&)))))..)..)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016153
GeneSymbolHSFX1
Binding site694,717
Score0.808
Seed1
Au0.441
Energy-20.2
Binding len23
Me-7.559
Phylopstem-0.18398855555555554
Phylopflank-0.2556740524999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure