Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCACAACAGGGCAGCTGCAGA
((((((((((.(((((..(((&)))..)))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016155
GeneSymbolMMP17
Binding site298,322
Score0.846
Seed1
Au0.368
Energy-25.7
Binding len24
Me-6.762
Phylopstem3.4824436
Phylopflank3.6305675582624994
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure