Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGCTGCTGCTGCTGCC
..(((((.(((((.(((.(((&))).))).))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016155
GeneSymbolMMP17
Binding site1842,1862
Score0.923
Seed0
Au0.309
Energy-22.9
Binding len20
Me-8.127
Phylopstem0.7195922000000001
Phylopflank-0.09554752312500002
Longest consecutive pairings5
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure