Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCGAGGCAGTGGAGATGGAAGTCCAAGCTGCAGCTGTGGCTGTG
..(((((((((((((((....&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016157
GeneSymbolTRO
Binding site2014,2061
Score1.0
Seed1
Au0.426
Energy-23.3
Binding len17
Me-4.957
Phylopstem0.8983094466666667
Phylopflank1.0551343412499998
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure