Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAATCAGCATTACAACACCTCCTTGCTTGCCGCTGCAGCAGCAGC
((((.((((((((.(((((..&.))))).)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016166
GeneSymbolPIAS1
Binding site1666,1712
Score0.846
Seed0
Au0.485
Energy-24.8
Binding len21
Me-8.913
Phylopstem6.557379999999999
Phylopflank4.14473064125
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure