Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCCTTCCAGGTT
....(.(((.(((((((((((&)))))))))))...))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016166
GeneSymbolPIAS1
Binding site689,709
Score0.923
Seed0
Au0.559
Energy-19.3
Binding len20
Me-12.69
Phylopstem5.440792181818181
Phylopflank6.3295297375
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure