Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTAGGACATCCATGCCAGGTG
(((((((((...((((......&.))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016169
GeneSymbolSUFU
Binding site4658,4680
Score0.846
Seed1
Au0.441
Energy-17.7
Binding len17
Me-11.352
Phylopstem-0.2869440555555556
Phylopflank0.8427417591250002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure