Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAGCGCCTCAGCCCTGGACTGTTAGAGGTGCTGCAGCTGCT
..(((((((((((((.(((((&)))))))...........................))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016172
GeneSymbolUBAC1
Binding site1515,1561
Score0.923
Seed1
Au0.471
Energy-23.4
Binding len46
Me-5.19
Phylopstem2.726458897825
Phylopflank3.0883370499999994
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure