Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTCGCGGGCAAGGTGCTGCGGCTGCAC
.((((((((((((((((((((&))))).)))........)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016172
GeneSymbolUBAC1
Binding site232,262
Score0.846
Seed1
Au0.324
Energy-22.9
Binding len30
Me-3.793
Phylopstem0.39206710000000006
Phylopflank0.17229042
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure