Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCAGTGTGTAAACTAGTGCCAGGTG
((((((((((((.(((((((..&))))))).)))........))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016173
GeneSymbolHEMK1
Binding site9029,9058
Score0.846
Seed1
Au0.485
Energy-23.5
Binding len29
Me-5.227
Phylopstem-0.595488898
Phylopflank-0.30429638975
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure