Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTCATTCTGTTGCCAGGC
.(((((((((.((((.((((((&)))))))))).))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016173
GeneSymbolHEMK1
Binding site15751,15773
Score0.846
Seed1
Au0.544
Energy-20.0
Binding len22
Me-6.851
Phylopstem-0.042832
Phylopflank-0.04138234862499994
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure