Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCCCCAGCTGCAT
.((((((((.(((((...(((&)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016173
GeneSymbolHEMK1
Binding site2683,2701
Score0.821
Seed1
Au0.353
Energy-23.6
Binding len18
Me-5.269
Phylopstem0.207542325
Phylopflank0.04887863362500007
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure