Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCAGCAGCTGG
...(((((((((((((.....&)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016173
GeneSymbolHEMK1
Binding site9161,9176
Score0.923
Seed0
Au0.441
Energy-22.0
Binding len15
Me-6.515
Phylopstem0.39435491428571423
Phylopflank0.14339421175000006
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure