Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCCAAGAAGCGGCTGCGGG
((((((((((..(((...(((&)))...)))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330618
GeneSymbolCYHR1
Binding site441,464
Score0.846
Seed1
Au0.147
Energy-21.8
Binding len23
Me-10.342
Phylopstem-0.4455814
Phylopflank0.11900239999999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure