Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGG
(((((((((((((((((((((&.))))...)))))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016175
GeneSymbolMRNIP
Binding site486,520
Score0.846
Seed1
Au0.279
Energy-28.3
Binding len27
Me-3.938
Phylopstem0.067372252
Phylopflank0.20082892875
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end8
PositionCDS
2D Structure