Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTATAGCGTTTATCAGCTGTG
..(((((((..((((((((((&))))))))))......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016179
GeneSymbolTRPC4
Binding site3237,3261
Score0.923
Seed1
Au0.676
Energy-18.9
Binding len24
Me-9.024
Phylopstem0.05381128000000002
Phylopflank-0.4955064225000001
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure