Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCGCCTCCTGCCTTGCCGCCTGCAAA
((((((..(((((.(((((((&.))))..)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016185
GeneSymbolJPT1
Binding site1068,1098
Score0.923
Seed0
Au0.515
Energy-20.0
Binding len25
Me-8.652
Phylopstem1.5550826666666666
Phylopflank1.99290116
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure