Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGGAATTACTGGGCTACCACTGCAGACTGCAGG
(((((((((((((.(((....&.))).))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016186
GeneSymbolSERPINA10
Binding site390,427
Score0.846
Seed1
Au0.471
Energy-22.2
Binding len20
Me-4.794
Phylopstem0.22251064285714284
Phylopflank0.039876808
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end3
Position5UTR
2D Structure