Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATGGCAGCAGCTTCCCGCGT
.(((((((((.(((((((((.&))))))))).))))))....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016192
GeneSymbolTMEFF2
Binding site144,168
Score0.846
Seed1
Au0.338
Energy-21.6
Binding len24
Me-6.618
Phylopstem0.17393374888888888
Phylopflank0.3064398152500001
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end7
Position5UTR
2D Structure