Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGTGGAGTGACAACCTTTTACTGTGTGCCAGGTA
((((((((((((..(((((...&.))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016194
GeneSymbolGNB5
Binding site8503,8539
Score1.0
Seed1
Au0.574
Energy-23.7
Binding len19
Me-6.084
Phylopstem6.673262916666666
Phylopflank5.121628594999999
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure