Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCCCCTGCAACCGTCAGTA
.....((((((((((((.((.&.)).)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016195
GeneSymbolKIF20B
Binding site6203,6226
Score1.0
Seed0
Au0.441
Energy-20.2
Binding len18
Me-13.666
Phylopstem-0.06687784615384616
Phylopflank0.09173194999999999
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure