Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCATGAAGAGTGCCGGGC
.((((((((...(((((.....&))))).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016196
GeneSymbolRBM19
Binding site3505,3524
Score0.923
Seed1
Au0.456
Energy-17.1
Binding len19
Me-11.207
Phylopstem2.7981725375
Phylopflank1.4652239000000007
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure