Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCCGGCAGGCACCCTGGCGGCCCAGCTGCAGG
(((((((((.((((((.(((.&.))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016196
GeneSymbolRBM19
Binding site1875,1911
Score0.923
Seed1
Au0.309
Energy-28.3
Binding len21
Me-5.18
Phylopstem2.1589744444444445
Phylopflank1.70193134625
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure