Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTACAGCTGTTTTTCTTGGTTGCT
..((((((((((((((((((.&)))))))))))).......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016200
GeneSymbolLSM8
Binding site12227,12253
Score0.923
Seed1
Au0.662
Energy-21.5
Binding len26
Me-4.957
Phylopstem0.10250823600000002
Phylopflank-0.03423662999999999
Longest consecutive pairings12
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure