Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCCAGCCCTCTGCGGCTGCAGA
((((((((((((((((((((.&)))))).))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016202
GeneSymbolZNF580
Binding site756,782
Score0.846
Seed1
Au0.324
Energy-25.6
Binding len26
Me-3.938
Phylopstem0.423587104
Phylopflank0.36674310750000005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure