Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATGTCCGAATACAGCAATATGTCACCGCCGCAGCCGGGGCGCAC
.(((.(((.(((((((..(((&.)))...))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016203
GeneSymbolPRKAG2
Binding site2558,2607
Score0.923
Seed0
Au0.426
Energy-23.6
Binding len22
Me-8.969
Phylopstem5.159874285714286
Phylopflank2.440661285
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure