Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCTGTGGCTGTGAC
((((((((((((((...((((&)))).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016206
GeneSymbolVGLL3
Binding site45,65
Score0.846
Seed1
Au0.206
Energy-21.5
Binding len20
Me-4.906
Phylopstem-0.3742359571428571
Phylopflank-0.3319368725
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure