Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGACCAGCTGCT
..((((((..((((((.....&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016207
GeneSymbolCPSF3
Binding site145,158
Score0.923
Seed1
Au0.397
Energy-17.8
Binding len13
Me-7.256
Phylopstem6.052959790033332
Phylopflank3.377586618505
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure