Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCAGTGGCTGCAGA
(((((((((((((((......&))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016208
GeneSymbolVPS28
Binding site633,650
Score0.923
Seed1
Au0.353
Energy-21.9
Binding len17
Me-4.171
Phylopstem2.2564955625
Phylopflank2.624498065
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure