Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCAGGAAAGGCTGTAAG
((((((((...(((((((((.&)))))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016209
GeneSymbolTRAPPC2L
Binding site1297,1321
Score0.846
Seed1
Au0.353
Energy-22.8
Binding len24
Me-9.061
Phylopstem-0.5281200333333333
Phylopflank-0.74055898375
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end7
Position3UTR
2D Structure