Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAAACACAGCCGCCAGAAGATATCAGCTGCAT
.(((((((((((((((..(((&))).....))))))))...........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016211
GeneSymbolSEC31A
Binding site556,591
Score0.846
Seed1
Au0.544
Energy-23.1
Binding len35
Me-3.793
Phylopstem4.415430949999999
Phylopflank3.764812375000001
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end6
PositionCDS
2D Structure