Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGACACGACTGCAGAGGTT
..((..((((((((((.((((&))))...))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016213
GeneSymbolTRIP4
Binding site387,409
Score0.923
Seed0
Au0.544
Energy-20.7
Binding len22
Me-10.977
Phylopstem-0.23749624999999996
Phylopflank3.3636011625000006
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure