Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACTGCCGCCTGCTGCAGG
(((((((.(((((.(((....&))).)))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016222
GeneSymbolDDX41
Binding site853,872
Score0.846
Seed1
Au0.338
Energy-22.7
Binding len19
Me-7.108
Phylopstem5.7248342857142855
Phylopflank5.419268432500001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure