Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACATGAACTATGCCAGA
..((((((((..((((......&))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016224
GeneSymbolSNX9
Binding site2398,2415
Score0.923
Seed1
Au0.809
Energy-14.8
Binding len17
Me-11.129
Phylopstem0.6701050624999999
Phylopflank1.3350816762500002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure