Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTATAGTAACCAGAAGGATGCAATACTGGCAGCTGCAGA
((((((((((.((((((....&.)))))...).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016228
GeneSymbolAADAT
Binding site1239,1279
Score0.808
Seed1
Au0.529
Energy-21.5
Binding len22
Me-6.762
Phylopstem3.0054535099999997
Phylopflank4.50134649625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure