Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCGGCCGCCATGTAAG
(((((...((((((((((((.&))))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016230
GeneSymbolCYB5R4
Binding site5752,5772
Score1.0
Seed0
Au0.529
Energy-22.1
Binding len20
Me-9.696
Phylopstem-0.1034465833333333
Phylopflank0.07941181249999998
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure