Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAGCTTGTACCAGGTGCCTGGAAAAGCTGCAGA
(((((((((((((((((((..&))))))))).))................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016230
GeneSymbolCYB5R4
Binding site6987,7024
Score0.923
Seed1
Au0.485
Energy-20.8
Binding len37
Me-3.938
Phylopstem-0.01110930555555556
Phylopflank0.08248039999999995
Longest consecutive pairings9
Position of longest consecutive pairings28
Pairings in 3prime end6
Position3UTR
2D Structure