Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGGCCAACTTCTGAAGTTTCTACCAGCTGCAGTTGCT
..(((((((((((((..(((.&.)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016232
GeneSymbolIL1RL1
Binding site408,450
Score1.0
Seed1
Au0.574
Energy-23.8
Binding len20
Me-5.19
Phylopstem0.33489607692307694
Phylopflank0.8317137862499999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure