Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGTGGTAGACTGCAGCAACCGAGAAGATATTTACAGCTCTGCAAA
((((((((((((((..(((((&))))).......))))))))).......................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016245
GeneSymbolHSD17B11
Binding site382,432
Score0.923
Seed1
Au0.574
Energy-19.2
Binding len50
Me-4.906
Phylopstem0.4127072405405407
Phylopflank0.4329514200000001
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end6
PositionCDS
2D Structure