Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGGGATTCCGCCAGCTGCT
..((((((((((((.(..(((&)))..).))..)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016246
GeneSymbolHSD17B14
Binding site389,412
Score0.846
Seed1
Au0.368
Energy-20.0
Binding len23
Me-5.692
Phylopstem3.0087891333333334
Phylopflank1.78610406
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure