Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACTGCATGTCAGGC
.((((((((.((..((((((..&)))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016248
GeneSymbolAKAP11
Binding site2560,2578
Score0.923
Seed1
Au0.574
Energy-18.0
Binding len18
Me-7.182
Phylopstem0.7668593375
Phylopflank1.63246793375
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure