Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCAACTGAAATGGCAGCTT
....((((((((((((((((.&))))))))))......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016248
GeneSymbolAKAP11
Binding site3799,3822
Score1.0
Seed0
Au0.647
Energy-19.6
Binding len23
Me-9.547
Phylopstem4.204948490909091
Phylopflank1.7729120650000003
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure