Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCCACCATAGAGAGAAGAAACCCCGGCCTGTACTGCGCTGCC
..(((((.(((((....((((&.))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016249
GeneSymbolMAGEC2
Binding site133,179
Score0.846
Seed0
Au0.397
Energy-20.2
Binding len18
Me-9.096
Phylopstem-0.2637652999999999
Phylopflank-0.10973136375000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure