Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CGGAAGATGGCGGCTGCGGCTGCGG
.(((((((((((((((.....&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016252
GeneSymbolBIRC6
Binding site217,242
Score0.846
Seed1
Au0.206
Energy-26.7
Binding len17
Me-3.793
Phylopstem4.406926666666667
Phylopflank2.084416875
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure