Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTAAAAATGTGCCAGGC
.(((((((((.....(((....&)))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016257
GeneSymbolHPCAL4
Binding site1997,2014
Score0.923
Seed1
Au0.603
Energy-16.6
Binding len17
Me-12.846
Phylopstem0.3859452222222222
Phylopflank0.45396064249999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure